Drira, Sabrine, Hattab, Tarek, Barrier, Nicolas, Morell, Alaia, Oliveros-Ramos, Ricardo, & Shin, Yunne-Jai. (2023). Species’ climate niche modeling framework Predicting historical & future species’ spatial distributions & estimation of species’ thermal tolerance (1.0.0). Zenodo. https://doi.org/10.5281/zenodo.7646698

Chevallier Adrien, Elise Banton, Fabien Moullec, Cléa Abello, Ignacio Pita-Vaca, Myron Peck, Bruno Ernande, & Yunne-Jai Shin. (2023). Participatory downscaling of global change SSP-RCP scenarios for the co-construction of plausible futures for French fisheries: why local scenarios matter?. https://doi.org/10.5281/zenodo.7650372

North-Sea case study

Alaia Morell, Yunne-Jai Shin, Nicolas Barrier, Morgane Travers-Trolet, Bruno Ernande (2023): Ev-OSMOSE: An eco-genetic marine ecosystem model. bioRxiv 2023.02.08.527669; doi: https://doi.org/10.1101/2023.02.08.527669

North-Sea case study

Osmose numerical code

The latest version of the Osmose model, including the Bioenergetic and Evolutionary modules,  is available on Github: https://github.com/osmose-model/osmose

Barrier, N., Oliveros-Ramos, R., Verley, P., Ernande, B., Lau-Medrano, W., Luján, C., Morell, A., Travers-Trolet, M., Velez, L., & Shin, Y. (2023). Object-oriented Simulator of Marine ecOSystEms (OSMOSE) (Version 4.3.2) [Computer software]. https://doi.org/10.5281/zenodo.7628348

Osmose model documentation

Osmose model documentation.

Barrier, Nicolas, Shin, Yunne-Jai, Verley, Philippe, Travers-Trolet, Morgane, Velez, Laure, Oliveros-Ramos, Ricardo, Grüss, Arnaud, & Morell, Alaia. (2021). Osmose model documentation (4.3). Zenodo.


Bioen-OSMSE configuration of the North-Sea. This configuration is accessible on request.

Morell, Alaia, Shin, Yunne-Jai, Barrier, Nicolas, Travers-Trolet, Morgane, Halouani, Ghassen, & Ernande, Bruno. (2023). Bioen-OSMOSE-NS (1.0.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7636041



Ev-OSMOSE configuration of the North-Sea. This configuration is accessible on request.

Morell, Alaia, Shin, Yunne-Jai, Barrier, Nicolas, Travers-Trolet, Morgane, & Ernande, Bruno. (2023). Ev-OSMOSE-NS (1.0.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7636111

Ecosystem modeling

Heymans JJ, Bundy A, Christensen V, Coll M, De Mutsert K, Fulton EA, Piroddi C, Shin YJ, Steenbeek J, Travers-Trolet M. The Ocean Decade: A true ecosystem modeling challenge. Frontiers in Marine Science 7:554573


Mediterranean Sea case study

Moullec F, Barrier N, Drira S, Guilhaumon F, Marsaleix P, Somot S, Ulses C, Velez L, Shin YJ. 2019. An End-to-End model reveals losers and winners in a warming Mediterranean Sea. Frontiers in Marine Science 6, 345.


Mediterranean Sea case study

Moullec F, Velez L, Verley P, Barrier N, Ulses C, Carbonara P, Esteban A, Follesa C, Gristina M, Jadaud A, Ligas A, Diaz EL, Maiorano P, Peristeraki P, Spedicato MT, Thasitis I, Valls M, Guilhaumon F, Shin YJ. Capturing the big picture of Mediterranean marine biodiversity with an end-to-end model of climate and fishing impacts. Progress in Oceanography 178: 102179.